1PBZ image
Deposition Date 2003-05-15
Release Date 2003-12-09
Last Version Date 2024-11-06
Entry Detail
PDB ID:
1PBZ
Keywords:
Title:
DE NOVO DESIGNED PEPTIDE-METALLOPORPHYRIN COMPLEX, SOLUTION STRUCTURE
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
14
Selection Criteria:
NO RESTRAINT VIOLATIONS GREATER THAN 0.3 ANGSTROMS
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:De novo designed cyclic peptide
Chain IDs:A, B
Chain Length:19
Number of Molecules:2
Biological Source:
Ligand Molecules
Primary Citation
De novo designed cyclic-peptide heme complexes
Proc.Natl.Acad.Sci.USA 100 13140 13145 (2003)
PMID: 14595023 DOI: 10.1073/pnas.2231273100

Abstact

The structural characterization of de novo designed metalloproteins together with determination of chemical reactivity can provide a detailed understanding of the relationship between protein structure and functional properties. Toward this goal, we have prepared a series of cyclic peptides that bind to water-soluble metalloporphyrins (FeIII and CoIII). Neutral and positively charged histidine-containing peptides bind with a high affinity, whereas anionic peptides bind only weakly to the negatively charged metalloporphyrin. Additionally, it was found that the peptide becomes helical only in the presence of the metalloporphyrin. CD experiments confirm that the metalloporphyrin binds specific cyclic peptides with high affinity and with isodichroic behavior. Thermal unfolding experiments show that the complex has "native-like" properties. Finally, NMR spectroscopy produced well dispersed spectra and experimental restraints that provide a high-resolution solution structure of the complexed peptide.

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Disease

Primary Citation of related structures
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