1PBI image
Deposition Date 1998-08-20
Release Date 1999-01-27
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1PBI
Title:
CRYSTAL STRUCTURE OF A BOWMAN-BIRK INHIBITOR FROM PEA SEEDS
Biological Source:
Source Organism:
Pisum sativum (Taxon ID: 3888)
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BOWMAN-BIRK PROTEINASE INHIBITOR
Chain IDs:A, B
Chain Length:72
Number of Molecules:2
Biological Source:Pisum sativum
Primary Citation
Dimeric crystal structure of a Bowman-Birk protease inhibitor from pea seeds.
J.Mol.Biol. 285 1195 1207 (1999)
PMID: 9887273 DOI: 10.1006/jmbi.1998.2351

Abstact

The trypsin/chymotrypsin inhibitors from winter pea seeds (PsTI) are members of the Bowman-Birk protease inhibitor (BBPI) family. The crystal structure of the isoform PsTI-IVb was determined by molecular replacement at 2.7 A resolution using the X-ray co-ordinates of the soybean inhibitor as a search model. The inhibitor crystallized with a nearly perfect 2-fold symmetric dimer in the asymmetric unit. Although the overall structure is very similar to that seen in other BBPIs, there are notable new structural features. Unlike the previously reported X-ray structures of BBPIs, the structure of PsTI-IVb includes the C-terminal segment of the molecule. The C-terminal tail of each subunit is partly beta-stranded and interacts with the 2-fold symmetry-related subunit, forming a beta-sheet with strands A and B of this subunit. The dimer is mainly stabilized by a large internal hydrogen-bonded network surrounded by two hydrophobic links. Fluorescence anisotropy decay measurements show that residues Tyr59 and Tyr43 are mobile in the picosecond time scale with a large amplitude. The fluorescence study and a molecular model of the simultaneous binding of PsTI-IVb to porcine trypsin and bovine chymotrypsin are compatible only with a monomeric state of the functional molecule in solution.

Legend

Protein

Chemical

Disease

Primary Citation of related structures