1P4N image
Entry Detail
PDB ID:
1P4N
Title:
Crystal Structure of Weissella viridescens FemX:UDP-MurNAc-pentapeptide complex
Biological Source:
PDB Version:
Deposition Date:
2003-04-23
Release Date:
2004-02-10
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:FemX
Chain IDs:A
Chain Length:335
Number of Molecules:1
Biological Source:Weissella viridescens
Polymer Type:polypeptide(L)
Description:UDP-MurNAc-pentapeptide
Chain IDs:B
Chain Length:5
Number of Molecules:1
Biological Source:Staphylococcus aureus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
UMA B ALA ?
Primary Citation
Crystal structures of Weissella viridescens FemX and its complex with UDP-MurNAc-pentapeptide: insights into FemABX family substrates recognition.
Structure 12 257 267 (2004)
PMID: 14962386 DOI: 10.1016/j.str.2004.01.006

Abstact

Members of the FemABX protein family are novel therapeutic targets, as they are involved in the synthesis of the bacterial cell wall. They catalyze the addition of amino acid(s) on the peptidoglycan precursor using aminoacylated tRNA as a substrate. We report here the high-resolution structure of Weissella viridescens L-alanine transferase FemX and its complex with the UDP-MurNAc-pentapeptide. This is the first structure example of a FemABX family member that does not possess a coiled-coil domain. FemX consists of two structurally equivalent domains, separated by a cleft containing the binding site of the UDP-MurNAc-pentapeptide and a long channel that traverses one of the two domains. Our structural studies bring new insights into the evolution of the FemABX and the related GNAT superfamilies, shed light on the recognition site of the aminoacylated tRNA in Fem proteins, and allowed manual docking of the acceptor end of the alanyl-tRNAAla.

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