1P16 image
Deposition Date 2003-04-11
Release Date 2003-07-15
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1P16
Keywords:
Title:
Structure of an mRNA capping enzyme bound to the phosphorylated carboxyl-terminal domain of RNA polymerase II
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.26
R-Value Work:
0.2
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:mRNA capping enzyme alpha subunit
Gene (Uniprot):CGT1
Mutagens:I2V
Chain IDs:A, B
Chain Length:395
Number of Molecules:2
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:phosphorylated peptide from C-terminal of RNA polymerase II
Chain IDs:C, D
Chain Length:21
Number of Molecules:2
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
SEP C SER PHOSPHOSERINE
Primary Citation
Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II.
Mol.Cell 11 1549 1561 (2003)
PMID: 12820968 DOI: 10.1016/S1097-2765(03)00187-4

Abstact

The 2.7 A structure of Candida albicans RNA guanylyltransferase Cgt1 cocrystallized with a carboxy-terminal domain (CTD) peptide composed of four Ser5-PO4 YSPTSPS heptad repeats illuminates distinct CTD-docking sites localized to the Cgt1 N-terminal nucleotidyl transferase domain. Tyr1, Pro3, Pro6, and Ser5-PO4 side chains from each of two YSPTSPS repeats contribute to the interface. Comparison to the Pin1-CTD structure shows that the CTD can assume markedly different conformations that are templated by particular binding partners. Structural plasticity combined with remodeling of CTD primary structure by kinases and phosphatases provides a versatile mechanism by which the CTD can recruit structurally dissimilar proteins during transcription. A binding site for the RNA triphosphatase component of the capping apparatus was also uncovered within the Cgt1 OB domain.

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Primary Citation of related structures
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