1OQD image
Deposition Date 2003-03-07
Release Date 2003-05-13
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1OQD
Keywords:
Title:
Crystal structure of sTALL-1 and BCMA
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.26
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tumor necrosis factor ligand superfamily member 13B, soluble form
Gene (Uniprot):TNFSF13B
Chain IDs:A, B, C, D, E, F, G, H, I, J
Chain Length:144
Number of Molecules:10
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Tumor necrosis factor receptor superfamily member 17
Gene (Uniprot):TNFRSF17
Chain IDs:K, L, M, N, O, P, Q, R
Chain Length:39
Number of Molecules:8
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Ligand-receptor binding revealed by the TNF family member TALL-1.
Nature 423 49 56 (2003)
PMID: 12721620 DOI: 10.1038/nature01543

Abstact

The tumour necrosis factor (TNF) ligand TALL-1 and its cognate receptors, BCMA, TACI and BAFF-R, were recently identified as members of the TNF superfamily, which are essential factors contributing to B-cell maturation. The functional, soluble fragment of TALL-1 (sTALL-1) forms a virus-like assembly for its proper function. Here we determine the crystal structures of sTALL-1 complexed with the extracellular domains of BCMA and BAFF-R at 2.6 and 2.5 A, respectively. The single cysteine-rich domain of BCMA and BAFF-R both have saddle-like architectures, which sit on the horseback-like surface formed by four coil regions on each individual sTALL-1 monomer. Three novel structural modules, D2, X2 and N, were revealed from the current structures. Sequence alignments, structural modelling and mutagenesis revealed that one disulphide bridge in BAFF-R is critical for determining the binding specificity of the extracellular domain eBAFF-R to TALL-1 instead of APRIL, a closely related ligand of TALL-1, which was confirmed by binding experiments in vitro.

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Primary Citation of related structures