1OP9 image
Deposition Date 2003-03-05
Release Date 2003-10-14
Last Version Date 2024-11-06
Entry Detail
PDB ID:
1OP9
Keywords:
Title:
Complex of human lysozyme with camelid VHH HL6 antibody fragment
Biological Source:
Source Organism:
Camelus dromedarius (Taxon ID: 9838)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HL6 camel VHH fragment
Chain IDs:A
Chain Length:121
Number of Molecules:1
Biological Source:Camelus dromedarius
Polymer Type:polypeptide(L)
Molecule:Lysozyme C
Gene (Uniprot):LYZ
Chain IDs:B
Chain Length:130
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
A camelid antibody fragment inhibits the formation of amyloid fibrils by human lysozyme
Nature 424 783 788 (2003)
PMID: 12917687 DOI: 10.1038/nature01870

Abstact

Amyloid diseases are characterized by an aberrant assembly of a specific protein or protein fragment into fibrils and plaques that are deposited in various organs and tissues, often with serious pathological consequences. Non-neuropathic systemic amyloidosis is associated with single point mutations in the gene coding for human lysozyme. Here we report that a single-domain fragment of a camelid antibody raised against wild-type human lysozyme inhibits the in vitro aggregation of its amyloidogenic variant, D67H. Our structural studies reveal that the epitope includes neither the site of mutation nor most residues in the region of the protein structure that is destabilized by the mutation. Instead, the binding of the antibody fragment achieves its effect by restoring the structural cooperativity characteristic of the wild-type protein. This appears to occur at least in part through the transmission of long-range conformational effects to the interface between the two structural domains of the protein. Thus, reducing the ability of an amyloidogenic protein to form partly unfolded species can be an effective method of preventing its aggregation, suggesting approaches to the rational design of therapeutic agents directed against protein deposition diseases.

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Primary Citation of related structures