1OOZ image
Deposition Date 2003-03-04
Release Date 2004-04-27
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1OOZ
Keywords:
Title:
Deletion mutant of SUCCINYL-COA:3-KETOACID COA TRANSFERASE FROM PIG HEART
Biological Source:
Source Organism:
Sus scrofa (Taxon ID: 9823)
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Succinyl-CoA:3-ketoacid-coenzyme A transferase
Gene (Uniprot):OXCT1
Mutagens:288-293 deletions
Chain IDs:A, B
Chain Length:475
Number of Molecules:2
Biological Source:Sus scrofa
Primary Citation
Structure of the CoA transferase from pig heart to 1.7 A resolution.
Acta Crystallogr.,Sect.D 60 1717 1725 (2004)
PMID: 15388917 DOI: 10.1107/S0907444904017974

Abstact

Succinyl-CoA:3-ketoacid CoA transferase (SCOT; EC 2.8.3.5) activates the acetoacetate in ketone bodies by transferring the CoA group from succinyl-CoA to acetoacetate to produce acetoacetyl-CoA and succinate. In the reaction, a glutamate residue at the active site of the enzyme forms a thioester bond with CoA and in this form the enzyme is subject to autolytic fragmentation. The crystal structure of pig heart SCOT has been solved and refined to 1.7 A resolution in a new crystal form. The structure shows the active-site glutamate residue in a conformation poised for autolytic fragmentation, with its side chain accepting one hydrogen bond from Asn281 and another from its own amide N atom. However, the conformation of this glutamate side chain would have to change for the residues that are conserved in the CoA transferases (Gln99, Gly386 and Ala387) to participate in stabilizing the tetrahedral transition states of the catalytic mechanism. The structures of a deletion mutant in two different crystal forms were also solved.

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Primary Citation of related structures