1ONS image
Deposition Date 2003-02-28
Release Date 2004-01-20
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1ONS
Keywords:
Title:
Crystal structure of Escherichia coli heat shock protein YedU
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.22
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chaperone protein hchA
Gene (Uniprot):hchA
Chain IDs:A
Chain Length:282
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
The crystal structure of Escherichia coli heat shock protein YedU reveals three potential catalytic active sites
Protein Sci. 12 2303 2311 (2003)
PMID: 14500888 DOI: 10.1110/ps.03121403

Abstact

The mRNA of Escherichia coli yedU gene is induced 31-fold upon heat shock. The 31-kD YedU protein, also calls Hsp31, is highly conserved in several human pathogens and has chaperone activity. We solved the crystal structure of YedU at 2.2 A resolution. YedU monomer has an alpha/beta/alpha sandwich domain and a small alpha/beta domain. YedU is a dimer in solution, and its crystal structure indicates that a significant amount of surface area is buried upon dimerization. There is an extended hydrophobic patch that crosses the dimer interface on the surface of the protein. This hydrophobic patch is likely the substrate-binding site responsible for the chaperone activity. The structure also reveals a potential protease-like catalytic triad composed of Cys184, His185, and Asp213, although no enzymatic activity could be identified. YedU coordinates a metal ion using His85, His122, and Glu90. This 2-His-1-carboxylate motif is present in carboxypeptidase A (a zinc enzyme), and a number of dioxygenases and hydroxylases that utilize iron as a cofactor, suggesting another potential function for YedU.

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