1OK8 image
Entry Detail
PDB ID:
1OK8
Keywords:
Title:
Crystal structure of the dengue 2 virus envelope glycoprotein in the postfusion conformation
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2003-07-19
Release Date:
2004-01-29
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:MAJOR ENVELOPE PROTEIN E
Chain IDs:A
Chain Length:394
Number of Molecules:1
Biological Source:DENGUE VIRUS TYPE 2
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Structure of the Dengue Virus Envelope Protein After Membrane Fusion
Nature 427 313 ? (2004)
PMID: 14737159 DOI: 10.1038/NATURE02165

Abstact

Dengue virus enters a host cell when the viral envelope glycoprotein, E, binds to a receptor and responds by conformational rearrangement to the reduced pH of an endosome. The conformational change induces fusion of viral and host-cell membranes. A three-dimensional structure of the soluble E ectodomain (sE) in its trimeric, postfusion state reveals striking differences from the dimeric, prefusion form. The elongated trimer bears three 'fusion loops' at one end, to insert into the host-cell membrane. Their structure allows us to model directly how these fusion loops interact with a lipid bilayer. The protein folds back on itself, directing its carboxy terminus towards the fusion loops. We propose a fusion mechanism driven by essentially irreversible conformational changes in E and facilitated by fusion-loop insertion into the outer bilayer leaflet. Specific features of the folded-back structure suggest strategies for inhibiting flavivirus entry.

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