1O94 image
Deposition Date 2002-12-11
Release Date 2003-02-06
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1O94
Title:
Ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TRIMETHYLAMINE DEHYDROGENASE
Gene (Uniprot):tmd
Chain IDs:A, B
Chain Length:729
Number of Molecules:2
Biological Source:METHYLOPHILUS METHYLOTROPHUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
Gene (Uniprot):etfB
Chain IDs:C, E
Chain Length:264
Number of Molecules:2
Biological Source:METHYLOPHILUS METHYLOTROPHUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT
Gene (Uniprot):etfA
Chain IDs:D, F
Chain Length:320
Number of Molecules:2
Biological Source:METHYLOPHILUS METHYLOTROPHUS
Primary Citation
Extensive Conformational Sampling in a Ternary Electron Transfer Complex.
Nat.Struct.Biol. 10 219 ? (2003)
PMID: 12567183 DOI: 10.1038/NSB894

Abstact

Here we report the crystal structures of a ternary electron transfer complex showing extensive motion at the protein interface. This physiological complex comprises the iron-sulfur flavoprotein trimethylamine dehydrogenase and electron transferring flavoprotein (ETF) from Methylophilus methylotrophus. In addition, we report the crystal structure of free ETF. In the complex, electron density for the FAD domain of ETF is absent, indicating high mobility. Positions for the FAD domain are revealed by molecular dynamics simulation, consistent with crystal structures and kinetic data. A dual interaction of ETF with trimethylamine dehydrogenase provides for dynamical motion at the protein interface: one site acts as an anchor, thereby allowing the other site to sample a large range of interactions, some compatible with rapid electron transfer. This study establishes the role of conformational sampling in multi-domain redox systems, providing insight into electron transfer between ETFs and structurally distinct redox partners.

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