1O7B image
Deposition Date 2002-10-29
Release Date 2003-10-23
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1O7B
Keywords:
Title:
Refined solution structure of the human TSG-6 Link module
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
250
Conformers Submitted:
20
Selection Criteria:
LEAST RESTRAINT VIOLATION
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TUMOR NECROSIS FACTOR-INDUCIBLE PROTEIN TSG-6
Gene (Uniprot):TNFAIP6
Chain IDs:A (auth: T)
Chain Length:98
Number of Molecules:1
Biological Source:HOMO SAPIENS
Ligand Molecules
Primary Citation

Abstact

The solution structure of the Link module from human TSG-6, a hyaladherin with important roles in inflammation and ovulation, has been determined in both its free and hyaluronan-bound conformations. This reveals a well defined hyaluronan-binding groove on one face of the Link module that is closed in the absence of ligand. The groove is lined with amino acids that have been implicated in mediating the interaction with hyaluronan, including two tyrosine residues that appear to form essential intermolecular hydrogen bonds and two basic residues capable of supporting ionic interactions. This is the first structure of a non-enzymic hyaladherin in its active state, and identifies a ligand-induced conformational change that is likely to be conserved across the Link module superfamily. NMR and isothermal titration calorimetry experiments with defined oligosaccharides have allowed us to infer the minimum length of hyaluronan that can be accommodated within the binding site and its polarity in the groove; these data have been used to generate a model of the complex formed between the Link module and a hyaluronan octasaccharide.

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Primary Citation of related structures