1NY9 image
Deposition Date 2003-02-12
Release Date 2003-04-15
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1NY9
Keywords:
Title:
Antibiotic binding domain of a TipA-class multidrug resistance transcriptional regulator
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
160
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Transcriptional activator tipA-S
Gene (Uniprot):tipA
Chain IDs:A
Chain Length:143
Number of Molecules:1
Biological Source:Streptomyces lividans
Ligand Molecules
Primary Citation
Structural basis for antibiotic recognition by the TipA-class of multidrug-resistance transcriptional regulators
Embo J. 22 1824 1834 (2003)
PMID: 12682015 DOI: 10.1093/emboj/cdg181

Abstact

The TipAL protein, a bacterial transcriptional regulator of the MerR family, is activated by numerous cyclic thiopeptide antibiotics. Its C-terminal drug-binding domain, TipAS, defines a subfamily of broadly distributed bacterial proteins including Mta, a central regulator of multidrug resistance in Bacillus subtilis. The structure of apo TipAS, solved by solution NMR [Brookhaven Protein Data Bank entry 1NY9], is composed of a globin-like alpha-helical fold with a deep surface cleft and an unfolded N-terminal region. Antibiotics bind within the cleft at a position that is close to the corresponding heme pocket in myo- and hemoglobin, and induce folding of the N-terminus. Thus the classical globin fold is well adapted not only for accommodating its canonical cofactors, heme and other tetrapyrroles, but also for the recognition of a variety of antibiotics where ligand binding leads to transcriptional activation and drug resistance.

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Primary Citation of related structures