1NT4 image
Deposition Date 2003-01-28
Release Date 2004-01-13
Last Version Date 2024-11-06
Entry Detail
PDB ID:
1NT4
Keywords:
Title:
Crystal structure of Escherichia coli periplasmic glucose-1-phosphatase H18A mutant complexed with glucose-1-phosphate
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glucose-1-phosphatase
Gene (Uniprot):agp
Mutations:H18A
Chain IDs:A, B
Chain Length:391
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Functional insights revealed by the crystal structures of Escherichia coli glucose-1-phosphatase.
J.Biol.Chem. 278 31412 31418 (2003)
PMID: 12782623 DOI: 10.1074/jbc.M213154200

Abstact

The Escherichia coli periplasmic glucose-1-phosphatase is a member of the histidine acid phosphatase family and acts primarily as a glucose scavenger. Previous substrate profiling studies have demonstrated some of the intriguing properties of the enzyme, including its unique and highly selective inositol phosphatase activity. The enzyme is also potentially involved in pathogenic inositol phosphate signal transduction pathways via type III secretion into the host cell. We have determined the crystal structure of E. coli glucose-1-phosphatase in an effort to unveil the structural mechanism underlying such unique substrate specificity. The structure was determined by the method of multiwavelength anomalous dispersion using a tungstate derivative together with the H18A inactive mutant complex structure with glucose 1-phosphate at 2.4-A resolution. In the active site of glucose-1-phosphatase, there are two unique gating residues, Glu-196 and Leu-24, in addition to the conserved features of histidine acid phosphatases. Together they create steric and electrostatic constraints responsible for the unique selectivity of the enzyme toward phytate and glucose-1-phosphate as well as its unusually high pH optimum for the latter. Based on the structural characterization, we were able to derive simple structural principles that not only precisely explains the substrate specificity of glucose-1-phosphatase and the hydrolysis products of various inositol phosphate substrates but also rationalizes similar general characteristics across the histidine acid phosphatase family.

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