1NPU image
Deposition Date 2003-01-20
Release Date 2004-03-23
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1NPU
Keywords:
Title:
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF MURINE PD-1
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Programmed cell death protein 1
Gene (Uniprot):Pdcd1
Mutations:C50S
Chain IDs:A
Chain Length:117
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Structural and functional analysis of the costimulatory receptor programmed death-1.
Immunity 20 337 347 (2004)
PMID: 15030777 DOI: 10.1016/S1074-7613(04)00051-2

Abstact

PD-1, a member of the CD28/CTLA-4/ICOS costimulatory receptor family, delivers negative signals that have profound effects on T and B cell immunity. The 2.0 A crystal structure of the extracellular domain of murine PD-1 reveals an Ig V-type topology with overall similarity to the CTLA-4 monomer; however, there are notable differences in regions relevant to function. Our structural and biophysical data show that PD-1 is monomeric both in solution as well as on cell surface, in contrast to CTLA-4 and other family members that are all disulfide-linked homodimers. Furthermore, our structure-based mutagenesis studies identify the ligand binding surface of PD-1, which displays significant differences compared to those present in the other members of the family.

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