1NN8 image
Entry Detail
PDB ID:
1NN8
Keywords:
Title:
CryoEM structure of poliovirus receptor bound to poliovirus
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2003-01-13
Release Date:
2004-01-27
Method Details:
Experimental Method:
Resolution:
15.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:coat protein VP1
Chain IDs:D (auth: 1)
Chain Length:302
Number of Molecules:1
Biological Source:Human poliovirus 1 Mahoney
Polymer Type:polypeptide(L)
Description:coat protein VP2
Chain IDs:E (auth: 2)
Chain Length:272
Number of Molecules:1
Biological Source:Human poliovirus 1 Mahoney
Polymer Type:polypeptide(L)
Description:coat protein VP3
Chain IDs:F (auth: 3)
Chain Length:235
Number of Molecules:1
Biological Source:Human poliovirus 1 Mahoney
Polymer Type:polypeptide(L)
Description:coat protein VP4
Chain IDs:G (auth: 4)
Chain Length:68
Number of Molecules:1
Biological Source:Human poliovirus 1 Mahoney
Polymer Type:polypeptide(L)
Description:poliovirus receptor
Chain IDs:A (auth: R), B (auth: S), C (auth: T)
Chain Length:302
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Complexes of poliovirus serotypes with their common cellular receptor, CD155
J.Virol. 77 4827 4835 (2003)
PMID: 12663789 DOI: 10.1128/JVI.77.8.4827-4835.2003

Abstact

Structures of all three poliovirus (PV) serotypes (PV1, PV2, and PV3) complexed with their cellular receptor, PV receptor (PVR or CD155), were determined by cryoelectron microscopy. Both glycosylated and fully deglycosylated CD155 exhibited similar binding sites and orientations in the viral canyon for all three PV serotypes, showing that all three serotypes use a common mechanism for cell entry. Difference maps between the glycosylated and deglycosylated CD155 complexes determined the sites of the carbohydrate moieties that, in turn, helped to verify the position of the receptor relative to the viral surface. The proximity of the CD155 carbohydrate site at Asn105 to the viral surface in the receptor-virus complex suggests that it might interfere with receptor docking, an observation consistent with the properties of mutant CD155. The footprints of CD155 on PV surfaces indicate that the south rim of the canyon dominates the virus-receptor interactions and may correspond to the initial CD155 binding state of the receptor-mediated viral uncoating. In contrast, the interaction of CD155 with the north rim of the canyon, especially the region immediately outside the viral hydrophobic pocket that normally binds a cellular "pocket factor," may be critical for the release of the pocket factor, decreasing the virus stability and hence initiating uncoating. The large area of the CD155 footprint on the PV surface, in comparison with other picornavirus-receptor interactions, could be a potential limitation on the viability of PV escape mutants from antibody neutralization. Many of these are likely to have lost their ability to bind CD155, resulting in there being only three PV serotypes.

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Primary Citation of related structures