1NF3 image
Deposition Date 2002-12-12
Release Date 2003-03-04
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1NF3
Title:
Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:G25K GTP-binding protein, placental isoform
Gene (Uniprot):CDC42
Mutations:Q61L
Chain IDs:A, B
Chain Length:195
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PAR-6B
Gene (Uniprot):Pard6b
Chain IDs:C, D
Chain Length:128
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation

Abstact

Cdc42 is a small GTPase that is required for cell polarity establishment in eukaryotes as diverse as budding yeast and mammals. Par6 is also implicated in metazoan cell polarity establishment and asymmetric cell divisions. Cdc42.GTP interacts with proteins that contain a conserved sequence called a CRIB motif. Uniquely, Par6 possesses a semi-CRIB motif that is not sufficient for binding to Cdc42. An adjacent PDZ domain is also necessary and is required for biological effects of Par6. Here we report the crystal structure of a complex between Cdc42 and the Par6 GTPase-binding domain. The semi-CRIB motif forms a beta-strand that inserts between the four strands of Cdc42 and the three strands of the PDZ domain to form a continuous eight-stranded sheet. Cdc42 induces a conformational change in Par6, detectable by fluorescence resonance energy transfer spectroscopy. Nuclear magnetic resonance studies indicate that the semi-CRIB motif of Par6 is at least partially structured by the PDZ domain. The structure highlights a novel role for a PDZ domain as a structural scaffold.

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Primary Citation of related structures