1NCF image
Deposition Date 1994-10-12
Release Date 1995-12-07
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1NCF
Title:
A NEW PARADIGM FOR TUMOR NECROSIS FACTOR SIGNALLING
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TUMOR NECROSIS FACTOR RECEPTOR
Gene (Uniprot):TNFRSF1A
Mutagens:R11M
Chain IDs:A, B
Chain Length:162
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Crystallographic evidence for dimerization of unliganded tumor necrosis factor receptor.
J.Biol.Chem. 270 13303 13307 (1995)
PMID: 7768931 DOI: 10.1074/jbc.270.22.13303

Abstact

Activation of the cell surface receptors for tumor necrosis factor (TNF) is effected by the aggregation of cytoplasmic domains that occurs when the extracellular domains of two or three receptors bind to trimeric TNF alpha or TNF beta. The structure of the type I TNF receptor extracellular domain (sTNF-R1), crystallized in the absence of TNF, has now been determined at 2.25-A resolution. The receptor itself is an elongated molecule comprising four disulfide-rich domains in a nearly linear array. Contrary to expectations, the unliganded domains are found to associate into dimers of two distinct types, in which monomers are related by local two-fold axes of symmetry. In one case, the receptors are antiparallel to each other and associate through an interface that overlaps the TNF binding site. If intact receptors were capable of such an association, their cytoplasmic domains would be separated by over 100 A. This interaction could inhibit signaling in the absence of TNF. Parallel dimers are also observed in which the dimer interface is well separated from the TNF binding site. Associations among TNF-bound parallel dimers could cause receptor clustering. Both dimers bury substantial areas of protein surface and are formed by polar and non-polar interactions.

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Primary Citation of related structures
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