1N6V image
Deposition Date 2002-11-12
Release Date 2003-07-15
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1N6V
Keywords:
Title:
Average structure of the interferon-binding ectodomain of the human type I interferon receptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Submitted:
1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interferon-alpha/beta receptor beta chain
Gene (Uniprot):IFNAR2
Chain IDs:A
Chain Length:212
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The human type I interferon receptor. NMR structure reveals the molecular basis of ligand binding.
Structure 11 791 802 (2003)
PMID: 12842042 DOI: 10.1016/S0969-2126(03)00120-5

Abstact

The potent antiviral and antiproliferative activities of human type I interferons (IFNs) are mediated by a single receptor comprising two subunits, IFNAR1 and IFNAR2. The structure of the IFNAR2 IFN binding ectodomain (IFNAR2-EC), the first helical cytokine receptor structure determined in solution, reveals the molecular basis for IFN binding. The atypical perpendicular orientation of its two fibronectin domains explains the lack of C domain involvement in ligand binding. A model of the IFNAR2-EC/IFNalpha2 complex based on double mutant cycle-derived constraints uncovers an extensive and predominantly aliphatic hydrophobic patch on the receptor that interacts with a matching hydrophobic surface of IFNalpha2. An adjacent motif of alternating charged side chains guides the two proteins into a tight complex. The binding interface may account for crossreactivity and ligand specificity of the receptor. This molecular description of IFN binding should be invaluable for study and design of IFN-based biomedical agents.

Legend

Protein

Chemical

Disease

Primary Citation of related structures