1N5V image
Deposition Date 2002-11-07
Release Date 2003-01-14
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1N5V
Keywords:
Title:
Crystal structure of a Monooxygenase from the gene ActVA-Orf6 of Streptomyces coelicolor in complex with the ligand Nanaomycin D
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.24 Å
R-Value Free:
0.27
R-Value Work:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ActVA-Orf6 monooxygenase
Gene (Uniprot):actVA 6
Chain IDs:A, B
Chain Length:112
Number of Molecules:2
Biological Source:Streptomyces coelicolor
Ligand Molecules
Primary Citation
The structure of ActVA-Orf6, a novel type of monooxygenase involved in actinorhodin biosynthesis
Embo J. 22 205 215 (2003)
PMID: 12514126 DOI: 10.1093/emboj/cdg031

Abstact

ActVA-Orf6 monooxygenase from Streptomyces coelicolor that catalyses the oxidation of an aromatic intermediate of the actinorhodin biosynthetic pathway is a member of a class of small monooxygenases that carry out oxygenation without the assistance of any of the prosthetic groups, metal ions or cofactors normally associated with activation of molecular oxygen. The overall structure is a ferredoxin-like fold with a novel dimeric assembly, indicating that the widely represented ferredoxin fold may sustain yet another functionality. The resolution (1.3 A) of the enzyme structure and its complex with substrate and product analogues allows us to visualize the mechanism of binding and activation of the substrate for attack by molecular oxygen, and utilization of two gates for the reaction components including a proton gate and an O(2)/H(2)O gate with a putative protein channel. This is the first crystal structure of an enzyme involved in the tailoring of a type II aromatic polyketide and illustrates some of the enzyme-substrate recognition features that may apply to a range of other enzymes involved in modifying a polyketide core structure.

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Primary Citation of related structures