1N4Q image
Entry Detail
PDB ID:
1N4Q
Keywords:
Title:
Protein Geranylgeranyltransferase type-I Complexed with a GGPP Analog and a KKKSKTKCVIL Peptide
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2002-11-01
Release Date:
2003-11-18
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Chain IDs:A, C, E, G, I, K
Chain Length:377
Number of Molecules:6
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Description:Geranylgeranyl transferase type-1 subunit beta
Chain IDs:B, D, F, H, J, L
Chain Length:377
Number of Molecules:6
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Description:Fusion protein consisting of transforming protein p21b and Ras related protein Rap-2b
Chain IDs:M, N, O, P, Q, R
Chain Length:11
Number of Molecules:6
Biological Source:Homo sapiens
Primary Citation
Structure of mammalian protein geranylgeranyltransferase type-I
EMBO J. 22 5963 5974 (2003)
PMID: 14609943 DOI: 10.1093/emboj/cdg571

Abstact

Protein geranylgeranyltransferase type-I (GGTase-I), one of two CaaX prenyltransferases, is an essential enzyme in eukaryotes. GGTase-I catalyzes C-terminal lipidation of >100 proteins, including many GTP- binding regulatory proteins. We present the first structural information for mammalian GGTase-I, including a series of substrate and product complexes that delineate the path of the chemical reaction. These structures reveal that all protein prenyltransferases share a common reaction mechanism and identify specific residues that play a dominant role in determining prenyl group specificity. This hypothesis was confirmed by converting farnesyltransferase (15-C prenyl substrate) into GGTase-I (20-C prenyl substrate) with a single point mutation. GGTase-I discriminates against farnesyl diphosphate (FPP) at the product turnover step through the inability of a 15-C FPP to displace the 20-C prenyl-peptide product. Understanding these key features of specificity is expected to contribute to optimization of anti-cancer and anti-parasite drugs.

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