1N4K image
Deposition Date 2002-10-31
Release Date 2002-12-25
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1N4K
Title:
Crystal structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with IP3
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Inositol 1,4,5-trisphosphate receptor type 1
Gene (Uniprot):Itpr1
Chain IDs:A
Chain Length:381
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.
Nature 420 696 700 (2002)
PMID: 12442173 DOI: 10.1038/nature01268

Abstact

In a variety of cells, the Ca2+ signalling process is mediated by the endoplasmic-reticulum-membrane-associated Ca2+ release channel, inositol 1,4,5-trisphosphate (InsP3) receptor (InsP3R). Being ubiquitous and present in organisms ranging from humans to Caenorhabditis elegans, InsP3R has a vital role in the control of cellular and physiological processes as diverse as cell division, cell proliferation, apoptosis, fertilization, development, behaviour, memory and learning. Mouse type I InsP3R (InsP3R1), found in high abundance in cerebellar Purkinje cells, is a polypeptide with three major functionally distinct regions: the amino-terminal InsP3-binding region, the central modulatory region and the carboxy-terminal channel region. Here we present a 2.2-A crystal structure of the InsP3-binding core of mouse InsP3R1 in complex with InsP3. The asymmetric, boomerang-like structure consists of an N-terminal beta-trefoil domain and a C-terminal alpha-helical domain containing an 'armadillo repeat'-like fold. The cleft formed by the two domains exposes a cluster of arginine and lysine residues that coordinate the three phosphoryl groups of InsP3. Putative Ca2+-binding sites are identified in two separate locations within the InsP3-binding core.

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Primary Citation of related structures