1N11 image
Deposition Date 2002-10-16
Release Date 2002-12-11
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1N11
Title:
D34 REGION OF HUMAN ANKYRIN-R AND LINKER
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.30
R-Value Work:
0.31
R-Value Observed:
0.31
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ankyrin
Gene (Uniprot):ANK1
Chain IDs:A
Chain Length:437
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Crystal structure of a 12 ANK repeat stack from human ankyrinR
Embo J. 21 6387 6396 (2002)
PMID: 12456646 DOI: 10.1093/emboj/cdf651

Abstact

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. The N-terminal, 'membrane-binding' domain of ankyrins contains 24 ANK repeats and mediates most binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. Here we report the crystal structure of a human ankyrinR construct containing ANK repeats 13-24 and a portion of the spectrin-binding domain. The ANK repeats are observed to form a contiguous spiral stack with which the spectrin-binding domain fragment associates as an extended strand. The structural information has been used to construct models of all 24 repeats of the membrane-binding domain as well as the interactions of the repeats with the Cl/HCO(3) anion exchanger and clathrin. These models, together with available binding studies, suggest that ion transporters such as the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.

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