1MZV image
Deposition Date 2002-10-10
Release Date 2003-10-28
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1MZV
Keywords:
Title:
Crystal Structure of Adenine Phosphoribosyltransferase (APRT) From Leishmania tarentolae
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Adenine Phosphoribosyltransferase
Gene (Uniprot):aprt
Chain IDs:A
Chain Length:235
Number of Molecules:1
Biological Source:Leishmania tarentolae
Primary Citation
Crystal structure of adenine phosphoribosyltransferase from Leishmania tarentolae: potential implications for APRT catalytic mechanism.
Biochim.Biophys.Acta 1696 31 39 (2004)
PMID: 14726202 DOI: 10.1016/j.bbapap.2003.09.003

Abstact

The three-dimensional structure of Leishmania tarentolae adenine phosphoribosyltransferase (APRT) in complex with adenosine-5-monophosphate (AMP) and a phosphate ion has been solved. Refinement against X-ray diffraction data extending to 2.2-A resolution led to a final crystallographic R factor of 18.3%. Structural comparisons amongst this APRT enzyme and other 'type I' PRTases whose structures have been determined reveal several important features of the PRTases catalytic mechanism. Based on structural superpositions and molecular interaction potential calculations, it was possible to suggest that the PRPP is the first substrate to bind, while the AMP is the last product to leave the active site, in accordance to recent kinetic studies performed with the Leishmania donovani APRT.

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