1MVQ image
Deposition Date 2002-09-26
Release Date 2003-10-07
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1MVQ
Title:
Cratylia mollis lectin (isoform 1) in complex with methyl-alpha-D-mannose
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.77 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:lectin, isoform 1
Chain IDs:A
Chain Length:236
Number of Molecules:1
Biological Source:Cratylia mollis
Primary Citation
Amino acid sequence and tertiary structure of Cratylia mollis seed lectin
Glycobiology 13 961 972 (2003)
PMID: 12966038 DOI: 10.1093/glycob/cwg115

Abstact

Carbohydrate-protein interactions play a key role in many biological processes. Cramoll is a lectin purified from Cratylia mollis seeds that is taxonomically related to concanavalin A (Con A). Although Cramoll and Con A have the same monosaccharide specificity, they have different glycoprotein binding profiles. We report the primary structure of Cramoll, determined by Edman degradation and mass spectrometry and its 1.77 A crystallographic structure and compare it with the three-dimensional structure of Con A in an attempt to understand how differential binding can be achieved by similar or nearly identical structures. We report here that Cramoll consists of 236 residues, with 82% identity with Con A, and that its topological architecture is essentially identical to Con A, because the Calpha positional differences are below 3.5 A. Cramoll and Con A have identical binding sites for MealphaMan, Mn2+, and Ca2+. However, we observed six substitutions in a groove adjacent to the extended binding site and two in the extended binding site that may explain the differences in binding of oligosaccharides and glycoproteins between Cramoll and Con A.

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Primary Citation of related structures
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