1MPU image
Deposition Date 2002-09-12
Release Date 2003-04-15
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1MPU
Keywords:
Title:
Crystal Structure of the free human NKG2D immunoreceptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.29
R-Value Work:
0.24
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NKG2-D type II integral membrane protein
Gene (Uniprot):KLRK1
Chain IDs:A
Chain Length:138
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Symmetry Recognizing Asymmetry: Analysis of the Interactions between the C-Type Lectin-like Immunoreceptor NKG2D and MHC Class I-like Ligands
Structure 11 411 422 (2003)
PMID: 12679019 DOI: 10.1016/S0969-2126(03)00047-9

Abstact

Engagement of diverse protein ligands (MIC-A/B, ULBP, Rae-1, or H60) by NKG2D immunoreceptors mediates elimination of tumorigenic or virally infected cells by natural killer and T cells. Three previous NKG2D-ligand complex structures show the homodimeric receptor interacting with the monomeric ligands in similar 2:1 complexes, with an equivalent surface on each NKG2D monomer binding intimately to a total of six distinct ligand surfaces. Here, the crystal structure of free human NKG2D and in silico and in vitro alanine-scanning mutagenesis analyses of the complex interfaces indicate that NKG2D recognition degeneracy is not explained by a classical induced-fit mechanism. Rather, the divergent ligands appear to utilize different strategies to interact with structurally conserved elements of the consensus NKG2D binding site.

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Primary Citation of related structures