1MI5 image
Deposition Date 2002-08-21
Release Date 2003-02-04
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1MI5
Keywords:
Title:
The crystal structure of LC13 TcR in complex with HLAB8-EBV peptide complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:MHC heavy chain
Chain IDs:A
Chain Length:277
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:beta 2 microglobulin
Gene (Uniprot):B2M
Chain IDs:B
Chain Length:99
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Epstein Barr Virus peptide
Chain IDs:C
Chain Length:9
Number of Molecules:1
Biological Source:
Polymer Type:polypeptide(L)
Molecule:TcR alpha chain
Gene (Uniprot):TRAC
Chain IDs:D
Chain Length:201
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:TcR beta chain
Gene (Uniprot):TRBC1
Chain IDs:E
Chain Length:241
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
A Structural Basis for the Selection of Dominant alphabeta T Cell Receptors in Antiviral Immunity
IMMUNITY 18 53 64 (2003)
PMID: 12530975 DOI: 10.1016/S1074-7613(02)00513-7

Abstact

We have examined the basis for immunodominant or "public" TCR usage in an antiviral CTL response. Residues encoded by each of the highly selected genetic elements of an immunodominant clonotype recognizing Epstein-Barr virus were critical to the antigen specificity of the receptor. Upon recognizing antigen, the immunodominant TCR undergoes extensive conformational changes in the complementarity determining regions (CDRs), including the disruption of the canonical structures of the germline-encoded CDR1alpha and CDR2alpha loops to produce an enhanced fit with the HLA-peptide complex. TCR ligation induces conformational changes in the TCRalpha constant domain thought to form part of the docking site for CD3epsilon. These findings indicate that TCR immunodominance is associated with structural properties conferring receptor specificity and suggest a novel structural link between TCR ligation and intracellular signaling.

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Primary Citation of related structures