1MFZ image
Entry Detail
PDB ID:
1MFZ
Keywords:
Title:
Partially refined 2.8 A Crystal structure of GDP-mannose dehydrogenase from P. aeruginosa
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2002-08-14
Release Date:
2003-05-06
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GDP-mannose 6-dehydrogenase
Chain IDs:A, B, C, D
Chain Length:436
Number of Molecules:4
Biological Source:Pseudomonas aeruginosa
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
The crystal structure of GDP-mannose dehydrogenase: A key enzyme in alginate biosynthesis of P. aeruginosa
Biochemistry 42 4658 4668 (2003)
PMID: 12705829 DOI: 10.1021/bi027328k

Abstact

The enzyme GMD from Pseudomonas aeruginosa catalyzes the committed step in the synthesis of the exopolysaccharide alginate. Alginate is a major component of P. aeruginosa biofilms that protect the bacteria from the host immune response and antibiotic therapy. The 1.55 A crystal structure of GMD in ternary complex with its cofactor NAD(H) and product GDP-mannuronic acid reveals that the enzyme forms a domain-swapped dimer with two polypeptide chains contributing to each active site. The extensive dimer interface provides multiple opportunities for intersubunit communication. Comparison of the GMD structure with that of UDP-glucose dehydrogenase reveals the structural basis of sugar binding specificity that distinguishes these two related enzyme families. The high-resolution structure of GMD provides detailed information on the active site of the enzyme and a template for structure-based inhibitor design.

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Primary Citation of related structures