1MEL image
Deposition Date 1996-06-06
Release Date 1997-06-16
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1MEL
Title:
CRYSTAL STRUCTURE OF A CAMEL SINGLE-DOMAIN VH ANTIBODY FRAGMENT IN COMPLEX WITH LYSOZYME
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.32
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:VH SINGLE-DOMAIN ANTIBODY
Chain IDs:A, B
Chain Length:148
Number of Molecules:2
Biological Source:Camelus dromedarius
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LYSOZYME
Gene (Uniprot):LYZ
Chain IDs:C (auth: L), D (auth: M)
Chain Length:129
Number of Molecules:2
Biological Source:Gallus gallus
Primary Citation
Crystal structure of a camel single-domain VH antibody fragment in complex with lysozyme.
Nat.Struct.Biol. 3 803 811 (1996)
PMID: 8784355 DOI: 10.1038/nsb0996-803

Abstact

The Camelidae is the only taxonomic family known to possess functional heavy-chain antibodies, lacking light chains. We report here the 2.5 A resolution crystal structure of a camel VH in complex with its antigen, lysozyme. Compared to human and mouse VH domains, there are no major backbone rearrangements in the VH framework. However, the architecture of the region of VH that interacts with a VL in a conventional FV is different from any previously seen. Moreover, the CDR1 region, although in sequence homologous to human CDR1, deviates fundamentally from the canonical structure. Additionally, one half of the CDR3 contacts the VH region which in conventional immunoglobulins interacts with a VL whereas the other half protrudes from the antigen binding site and penetrates deeply into the active site of lysozyme.

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Primary Citation of related structures