1MDV image
Deposition Date 1998-09-08
Release Date 1999-05-04
Last Version Date 2024-10-23
Entry Detail
PDB ID:
1MDV
Title:
KEY ROLE OF PHENYLALANINE 20 IN CYTOCHROME C3: STRUCTURE, STABILITY AND FUNCTION STUDIES
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.29
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CYTOCHROME C3
Gene (Uniprot):DVU_3171
Mutations:F20L
Chain IDs:A, B
Chain Length:107
Number of Molecules:2
Biological Source:Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Ligand Molecules
Primary Citation
Key role of phenylalanine 20 in cytochrome c3: structure, stability, and function studies.
Biochemistry 38 33 41 (1999)
PMID: 9890880 DOI: 10.1021/bi981593h

Abstact

Aromatic residues in c-type cytochromes might have an important function in the folding and/or electron transferring properties of the molecule. In the tetraheme cytochrome c3 (Mr 13 000) from Desulfovibrio vulgaris Hildenborough, Phe20, is located between heme 1 and heme 3 with its aromatic ring close and almost parallel to the ring plane of heme 1. We replaced this residue by a nonaromatic hydrophobe residue, leucine, and analyzed the effects in terms of functional, structural, and physicochemical properties. While the F20L replacement did not have any strong effects on the heme region stability, a decrease of the thermostability of the whole molecule was observed. In the same way, the four macroscopic redox potentials were affected by the mutation as well as the flexibility of the surface loop around heme 4. The F20L replacement itself and/or this structural modification might be responsible for the loss of the intermolecular cooperativity between F20L cytochrome c3 molecules.

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