1MDM image
Entry Detail
PDB ID:
1MDM
Title:
INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2002-08-07
Release Date:
2002-12-11
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.31
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PAIRED BOX PROTEIN PAX-5
Chain IDs:C (auth: A)
Chain Length:149
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:C-ETS-1 PROTEIN
Chain IDs:D (auth: B)
Chain Length:161
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polydeoxyribonucleotide
Description:PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER
Chain IDs:A (auth: C)
Chain Length:26
Number of Molecules:1
Biological Source:
Polymer Type:polydeoxyribonucleotide
Description:PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER
Chain IDs:B (auth: D)
Chain Length:26
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
STRUCTURAL ANALYSIS OF THE AUTOINHIBITION OF ETS-1 AND ITS ROLE IN PROTEIN PARTNERSHIPS
J.Biol.Chem. 277 45529 45536 (2002)
PMID: 12221090 DOI: 10.1074/jbc.M206327200

Abstact

The DNA-binding activity of the eukaryotic transcription factor Ets-1 (E26 avian erythroblastosis virus oncogene-E twenty-six) is negatively regulated by inhibitory regions that flank the ETS domain. Based on the results of solution studies, these N- and C-terminal inhibitory regions have been proposed to pack against the ETS domain and form an autoinhibitory module whose N terminus partially unfolds upon binding of Ets-1 to DNA. Mutations that disrupt autoinhibition of DNA binding also cause a structural change in the inhibitory region. We report here a crystallographic study of fragments of Ets-1 that provide structural details of the inhibitory module and the structural transition that accompanies DNA binding. The structures of free and DNA-bound Ets-1 fragments containing the ETS domain and the inhibitory regions confirm that the N-terminal inhibitory region contains two alpha-helices one of which unfolds upon Ets-1 binding to DNA. The observations from the crystal structure, coupled with mutagenesis experiments, allow us to propose a model for the inhibited form of Ets-1 and lend insight into the flexible interaction between Ets-1 and the acute myeloid leukemia 1 protein, AML1 (RUNX1).

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