1MDA image
Deposition Date 1992-03-02
Release Date 1993-10-31
Last Version Date 2024-06-05
Entry Detail
PDB ID:
1MDA
Title:
CRYSTAL STRUCTURE OF AN ELECTRON-TRANSFER COMPLEX BETWEEN METHYLAMINE DEHYDROGENASE AND AMICYANIN
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Observed:
0.28
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AMICYANIN
Gene (Uniprot):mauC
Chain IDs:E (auth: A), F (auth: B)
Chain Length:103
Number of Molecules:2
Biological Source:Paracoccus denitrificans
Polymer Type:polypeptide(L)
Molecule:METHYLAMINE DEHYDROGENASE (HEAVY SUBUNIT)
Chain IDs:A (auth: H), C (auth: J)
Chain Length:368
Number of Molecules:2
Biological Source:Paracoccus denitrificans
Polymer Type:polypeptide(L)
Molecule:METHYLAMINE DEHYDROGENASE (LIGHT SUBUNIT)
Chain IDs:B (auth: L), D (auth: M)
Chain Length:121
Number of Molecules:2
Biological Source:Paracoccus denitrificans
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TRQ B TRP ?
Ligand Molecules
Primary Citation

Abstact

The crystal structure of the complex between the quinoprotein methylamine dehydrogenase (MADH) and the type I blue copper protein amicyanin, both from Paracoccus denitrificans, has been determined at 2.5-A resolution using molecular replacement. The search model was MADH from Thiobacillus versutus. The amicyanin could be located in an averaged electron density difference map and the model improved by refinement and model building procedures. Nine beta-strands are observed within the amicyanin molecule. The copper atom is located between three antiparallel strands and is about 2.5 A below the protein surface. The major intermolecular interactions occur between amicyanin and the light subunit of MADH where the interface is largely hydrophobic. The copper atom of amicyanin and the redox cofactor of MADH are about 9.4 A apart. One of the copper ligands, His 95, lies between the two redox centers and may facilitate electron transfer between them.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback