1MD7 image
Deposition Date 2002-08-07
Release Date 2003-08-07
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1MD7
Keywords:
Title:
Monomeric structure of the zymogen of complement protease C1r
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.24
Space Group:
P 64
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:C1R COMPLEMENT SERINE PROTEASE
Gene (Uniprot):C1R
Mutagens:S637A
Chain IDs:A
Chain Length:328
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Monomeric structures of the zymogen and active catalytic domain of complement protease c1r: further insights into the c1 activation mechanism
Structure 10 1509 1519 (2002)
PMID: 12429092 DOI: 10.1016/S0969-2126(02)00881-X

Abstact

C1r is the serine protease (SP) that mediates autoactivation of C1, the complex that triggers the classical complement pathway. We have determined the crystal structure of two fragments from the human C1r catalytic domain, each encompassing the second complement control protein (CCP2) module and the SP domain. The wild-type species has an active structure, whereas the S637A mutant is a zymogen. The structures reveal a restricted hinge flexibility of the CCP2-SP interface, and both are characterized by the unique alpha-helical conformation of loop E. The zymogen activation domain exhibits high mobility, and the active structure shows a restricted access to most substrate binding subsites. Further implications relevant to the C1r self-activation process are derived from protein-protein interactions in the crystals.

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Primary Citation of related structures
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