1M4V image
Deposition Date 2002-07-05
Release Date 2002-07-17
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1M4V
Keywords:
Title:
Crystal structure of SET3, a superantigen-like protein from Staphylococcus aureus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SET3, superantigen-like protein
Gene (Uniprot):set3
Chain IDs:A, B
Chain Length:204
Number of Molecules:2
Biological Source:Staphylococcus aureus
Primary Citation
The three-dimensional structure of a superantigen-like protein, SET3, from a pathogenicity island of the Staphylococcus aureus genome
J.Biol.Chem. 277 32274 32281 (2002)
PMID: 12082105 DOI: 10.1074/jbc.M203914200

Abstact

The staphylococcal enterotoxin-like toxins (SETs) are a family of proteins encoded within the Staphylococcus aureus genome that were identified by their similarity to the well described bacterial superantigens. The first crystal structure of a member of the SET family, SET3, has been determined to 1.9 A (R = 0.205, R(free) = 0.240) and reveals a fold characteristic of the superantigen family but with significant differences. The SET proteins are secreted at varying levels by staphylococcal isolates, and seroconversion studies of normal individuals indicate that they are strongly antigenic to humans. Recombinant SETs do not exhibit any of the properties expected of superantigens such as major histocompatibility complex class II binding or broad T-cell activation, suggesting they have an entirely different function. The fact that the whole gene family is clustered within the pathogenicity island SaIn2 of the S. aureus genome suggests that they are involved in host/pathogen interactions.

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Primary Citation of related structures