1M31 image
Entry Detail
PDB ID:
1M31
Title:
Three-Dimensional Solution Structure of Apo-Mts1
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2002-06-26
Release Date:
2002-10-30
Method Details:
Experimental Method:
Conformers Calculated:
75
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Placental calcium-binding protein
Chain IDs:A, B
Chain Length:101
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Solution structure of human Mts1 (S100A4) as determined by NMR spectroscopy.
Biochemistry 41 12670 12680 (2002)
PMID: 12379109 DOI: 10.1021/bi020365r

Abstact

Mts1 is a member of the S100 family of Ca2+-binding proteins and is implicated in promoting tumor progression and metastasis. To better understand the structure-function relationships of this protein and to begin characterizing its Ca2+-dependent interaction with protein binding targets, the three-dimensional structure of mts1 was determined in the apo state by NMR spectroscopy. As with other S100 protein family members, mts1 is a symmetric homodimer held together by noncovalent interactions between two helices from each subunit (helices 1, 4, 1', and 4') to form an X-type four-helix bundle. Each subunit of mts1 has two EF-hand Ca2+-binding domains: a pseudo-EF-hand (or S100-hand) and a typical EF-hand that are brought into proximity by a small two-stranded antiparallel beta-sheet. The S100-hand is formed by helices 1 and 2, and is similar in conformation to other members of the S100 family. In the typical EF-hand, the position of helix 3 is similar to that of another member of the S100 protein family, calcyclin (S100A6), and less like that of other S100 family members for which three-dimensional structures are available in the calcium-free state (e.g., S100B and S100A1). The differences in the position of helix 3 in the apo state of these four S100 proteins are likely due to variations in the amino acid sequence in the C-terminus of helix 4 and in loop 2 (the hinge region) and could potentially be used to subclassify the S100 protein family.

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Primary Citation of related structures