1M27 image
Deposition Date 2002-06-21
Release Date 2003-05-06
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1M27
Title:
Crystal structure of SAP/FynSH3/SLAM ternary complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SH2 domain protein 1A
Gene (Uniprot):SH2D1A
Chain IDs:A
Chain Length:104
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Signaling lymphocytic activation molecule
Gene (Uniprot):SLAMF1
Chain IDs:B
Chain Length:11
Number of Molecules:1
Biological Source:
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proto-oncogene tyrosine-protein kinase FYN
Gene (Uniprot):FYN
Chain IDs:C
Chain Length:61
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
SAP couples Fyn to SLAM immune receptors.
NAT.CELL BIOL. 5 155 160 (2003)
PMID: 12545174 DOI: 10.1038/ncb920

Abstact

SAP (SLAM-associated protein) is a small lymphocyte-specific signalling molecule that is defective or absent in patients with X-linked lymphoproliferative syndrome (XLP). Consistent with its single src homology 2 (SH2) domain architecture and unusually high affinity for SLAM (also called CD150), SAP has been suggested to function by blocking binding of SHP-2 or other SH2-containing signalling proteins to SLAM receptors. Additionally, SAP has recently been shown to be required for recruitment and activation of the Src-family kinase FynT after SLAM ligation. This signalling 'adaptor' function has been difficult to conceptualize, because unlike typical SH2-adaptor proteins, SAP contains only a single SH2 domain and lacks other recognized protein interaction domains or motifs. Here, we show that the SAP SH2 domain binds to the SH3 domain of FynT and directly couples FynT to SLAM. The crystal structure of a ternary SLAM-SAP-Fyn-SH3 complex reveals that SAP binds the FynT SH3 domain through a surface-surface interaction that does not involve canonical SH3 or SH2 binding interactions. The observed mode of binding to the Fyn-SH3 domain is expected to preclude the auto-inhibited conformation of Fyn, thereby promoting activation of the kinase after recruitment. These findings broaden our understanding of the functional repertoire of SH3 and SH2 domains.

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Primary Citation of related structures
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