1M1N image
Deposition Date 2002-06-19
Release Date 2002-09-11
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1M1N
Keywords:
Title:
Nitrogenase MoFe protein from Azotobacter vinelandii
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.16 Å
R-Value Free:
0.14
R-Value Work:
0.12
R-Value Observed:
0.12
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nitrogenase molybdenum-iron protein alpha chain
Gene (Uniprot):nifD
Chain IDs:A, C, E, G
Chain Length:491
Number of Molecules:4
Biological Source:Azotobacter vinelandii
Polymer Type:polypeptide(L)
Molecule:Nitrogenase molybdenum-iron protein beta chain
Gene (Uniprot):nifK
Chain IDs:B, D, F, H
Chain Length:522
Number of Molecules:4
Biological Source:Azotobacter vinelandii
Primary Citation
Nitrogenase MoFe-protein at 1.16 A resolution: a central ligand in the FeMo-cofactor.
Science 297 1696 1700 (2002)
PMID: 12215645 DOI: 10.1126/science.1073877

Abstact

A high-resolution crystallographic analysis of the nitrogenase MoFe-protein reveals a previously unrecognized ligand coordinated to six iron atoms in the center of the catalytically essential FeMo-cofactor. The electron density for this ligand is masked in structures with resolutions lower than 1.55 angstroms, owing to Fourier series termination ripples from the surrounding iron and sulfur atoms in the cofactor. The central atom completes an approximate tetrahedral coordination for the six iron atoms, instead of the trigonal coordination proposed on the basis of lower resolution structures. The crystallographic refinement at 1.16 angstrom resolution is consistent with this newly detected component being a light element, most plausibly nitrogen. The presence of a nitrogen atom in the cofactor would have important implications for the mechanism of dinitrogen reduction by nitrogenase.

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Primary Citation of related structures