1M1C image
Deposition Date 2002-06-18
Release Date 2002-10-02
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1M1C
Keywords:
Title:
Structure of the L-A virus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.26
R-Value Work:
0.26
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Major coat protein
Gene (Uniprot):gag
Chain IDs:A, B
Chain Length:680
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae virus L-A (L1)
Ligand Molecules
Primary Citation
L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.
Nat.Struct.Biol. 9 725 728 (2002)
PMID: 12244300 DOI: 10.1038/nsb844

Abstact

The structure of the yeast L-A virus was determined by X-ray crystallography at 3.4 A resolution. The L-A dsRNA virus is 400 A in diameter and contains a single protein shell of 60 asymmetric dimers of the coat protein, a feature common among the inner protein shells of dsRNA viruses and probably related to their unique mode of transcription and replication. The two identical subunits in each dimer are in non-equivalent environments and show substantially different conformations in specific surface regions. The L-A virus decaps cellular mRNA to efficiently translate its own uncapped mRNA. Our structure reveals a trench at the active site of the decapping reaction and suggests a role for nearby residues in the reaction.

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Primary Citation of related structures