1LWE image
Deposition Date 2002-05-31
Release Date 2002-10-30
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1LWE
Keywords:
TRANSFERASE
Title:
CRYSTAL STRUCTURE OF M41L/T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE (RTMN) IN COMPLEX WITH NEVIRAPINE
Biological Source:
Source Organism(s):
Human immunodeficiency virus 1 (Taxon ID: 11676)
Expression System(s):
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.81 Å
R-Value Free:
0.30
R-Value Work:
0.21
Space Group:
P 21 21 21
1LWE validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 REVERSE TRANSCRIPTASE
Gene (Uniprot):gag-pol
Mutagens:M41L/T215Y
Chain IDs:A
Chain Length:560
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1
UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 REVERSE TRANSCRIPTASE
Gene (Uniprot):gag-pol
Mutagens:M41L/T215Y
Chain IDs:B
Chain Length:440
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1
UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD A CYS 3-SULFINOALANINE
Ligand Molecules
NVP
PO4
Primary Citation
Crystal structures of Zidovudine- or Lamivudine-resistant human immunodeficiency virus type 1 reverse transcriptases containing mutations at codons 41, 184, and 215.
Chamberlain, P.P, Ren, J, Nichols, C.E, Douglas, L, Lennerstrand, J, Larder, B.A, Stuart, D.I, Stammers, D.K, Ren, J, Nichols, C.E, Bird, L.E, Chamberlain, P, Weaver, K.L, Short, S.A, Stuart, D.I, Stammers, D.K, Chan, J.H, Hong, J.S, Hunter III, R.N, Orr, G.F, Cowan, J.R, Sherman, D.B, Sparks, S.M, Reitter, B.E, Andrews III, C.W, Hazen, R.J, St Clair, M, Boone, L.R, Ferris, R.G, Creech, K.L, Roberts, G.B, Short, S.A, Weaver, K.L, Ott, R.J, Ren, J, Hopkins, A.L, Stuart, D.I, Stammers, D.K, Ren, J, Milton, J, Weaver, K.L, Short, S.A, Stuart, D.I, Stammers, D.K, Ren, J, Nichols, C.E, Bird, L.E, Fujiwara, T, Sugimoto, H, Stuart, D.I, Stammers, D.K, Ren, J, Diprose, J, Warren, J, Esnouf, R.M, Bird, L.E, Ikemizu, S, Slater, M, Milton, J, Balzarini, J, Stuart, D.I, Stammers, D.K, Ren, J, Esnouf, R.M, Hopkins, A.L, Stuart, D.I, Stammers, D.K, Hopkins, A.L, Ren, J, Tanaka, H, Baba, M, Okamato, M, Stuart, D.I, Stammers, D.K, Ren, J, Esnouf, R.M, Hopkins, A.L, Warren, J, Balzarini, J, Stuart, D.I, Stammers, D.K, Ren, J, Esnouf, R.M, Hopkins, A.L, Jones, E.Y, Kirby, I, Keeling, J, Ross, C.K, Larder, B.A, Stuart, D.I, Stammers, D.K, Esnouf, R.M, Ren, J, Garman, E.F, Somers, D.O, Ross, C.K, Jones, E.Y, Stammers, D.K, Stuart, D.I, Esnouf, R.M, Ren, J, Hopkins, A.L, Ross, C.K, Jones, E.Y, Stammers, D.K, Stuart, D.I, Hopkins, A.L, Ren, J, Esnouf, R.M, Willcox, B.E, Jones, E.Y, Ross, C.K, Miyasaka, T, Walker, R.T, Tanaka, H, Stammers, D.K, Stuart, D.I, Ren, J, Esnouf, R.M, Hopkins, A.L, Ross, C.K, Jones, E.Y, Stammers, D.K, Stuart, D.I, Ren, J, Esnouf, R.M, Garman, E, Somers, D.O, Ross, C.K, Kirby, I, Keeling, J, Darby, G, Jones, E.Y, Stuart, D.I, Stammers, D.K, Esnouf, R.M, Ren, J, Ross, C.K, Jones, E.Y, Stammers, D.K, Stuart, D.I, Stammers, D.K, Somers, D.O, Ross, C.K, Kirby, I, Ray, P.H, Wilson, J.E, Norman, M, Ren, J, Esnouf, R.M, Garman, E, Jones, E.Y, Stuart, D.I.Show
J.Virol. 76 10015 10019 (2002)
PMID: 12208978 DOI: 10.1128/JVI.76.19.10015-10019.2002

Abstact

Six structures of human immunodeficiency virus type 1 (HIV-1) reverse transcriptase (RT) containing combinations of resistance mutations for zidovudine (AZT) (M41L and T215Y) or lamivudine (M184V) have been determined as inhibitor complexes. Minimal conformational changes in the polymerase or nonnucleoside RT inhibitor sites compared to the mutant RTMC (D67N, K70R, T215F, and K219N) are observed, indicating that such changes may occur only with certain combinations of mutations. Model building M41L and T215Y into HIV-1 RT-DNA and docking in ATP that is utilized in the pyrophosphorolysis reaction for AZT resistance indicates that some conformational rearrangement appears necessary in RT for ATP to interact simultaneously with the M41L and T215Y mutations.

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Disease

Primary Citation of related structures
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