1LV9 image
Deposition Date 2002-05-27
Release Date 2002-09-18
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1LV9
Keywords:
Title:
CXCR3 Binding Chemokine IP-10/CXCL10
Biological Source:
Source Organism:
(Taxon ID: )
Method Details:
Experimental Method:
Conformers Calculated:
20
Conformers Submitted:
10
Selection Criteria:
structures with favorable non-bond energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Small inducible cytokine B10
Gene (Uniprot):CXCL10
Chain IDs:A
Chain Length:77
Number of Molecules:1
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MLE A LEU N-METHYLLEUCINE
Ligand Molecules
Primary Citation
The CXCR3 binding chemokine IP-10/CXCL10: structure and receptor interactions.
Biochemistry 41 10418 10425 (2002)
PMID: 12173928 DOI: 10.1021/bi026020q

Abstact

The structure of IP-10 was solved by NMR spectroscopy and represents the first structure from the class of agonists toward the receptor CXCR3. CXCR3 binding chemokines are unique in their ability to bind receptors from both the CC and CXC classes of chemokine receptors. An unusual structural feature of IP-10 was identified that may provide the basis for the ability of IP-10 to bind both CXCR3 and CCR3. The surface of IP-10 that interacts with the N-terminus of CXCR3 was defined by monitoring changes in the NMR spectrum of IP-10 upon addition of a CXCR3 N-terminal peptide. These studies indicated that the interaction involves a hydrophobic cleft, formed by the N-loop and 40s-loop region of IP-10, similar to the interaction surface observed for other chemokines such as IL-8. An additional region of interaction was observed that consists of a hydrophobic cleft formed by the N-terminus of IP-10 and 30s-loop of IP-10.

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Primary Citation of related structures