1LP3 image
Deposition Date 2002-05-07
Release Date 2002-08-07
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1LP3
Keywords:
Title:
The Atomic Structure of Adeno-Associated Virus (AAV-2), a Vector for Human Gene Therapy
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.34
R-Value Work:
0.33
R-Value Observed:
0.33
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:AAV-2 capsid protein
Gene (Uniprot):VP1
Chain IDs:A
Chain Length:519
Number of Molecules:1
Biological Source:Adeno-associated virus - 2
Ligand Molecules
Primary Citation
The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy.
Proc.Natl.Acad.Sci.USA 99 10405 10410 (2002)
PMID: 12136130 DOI: 10.1073/pnas.162250899

Abstact

The structure of the adeno-associated virus (AAV-2) has been determined to 3-A resolution by x-ray crystallography. AAV is being developed as a vector for gene therapy to treat diseases including hemophilia, cancer, and cystic fibrosis. As in the distantly related autonomous parvoviruses, the capsid protein has a beta-barrel fold, but long loops between the beta-strands share little structural homology with other parvoviruses, leading to unique surface features. Most prominent are groups of threefold-related peaks, each an intimate association of loops from two neighboring subunits. Mutations affecting cell entry and receptor binding are clustered near the positively charged side of each peak, implicating the region in attachment to the cellular receptor, heparan sulfate proteoglycan. Amino acids involved in antibody binding are in the same general vicinity. The structure will guide rational engineering of vector capsids to tailor cellular targeting and to avoid immediate neutralization by an immune system sensitized by prior exposure to AAV.

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Primary Citation of related structures