1LOF image
Deposition Date 1993-01-27
Release Date 1994-04-30
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1LOF
Keywords:
Title:
X-RAY STRUCTURE OF A BIANTENNARY OCTASACCHARIDE-LECTIN COMPLEX AT 2.3 ANGSTROMS RESOLUTION
Biological Source:
Source Organism:
Lathyrus ochrus (Taxon ID: 3858)
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LEGUME ISOLECTIN I (ALPHA CHAIN)
Chain IDs:A
Chain Length:181
Number of Molecules:1
Biological Source:Lathyrus ochrus
Polymer Type:polypeptide(L)
Molecule:LEGUME ISOLECTIN I (BETA CHAIN)
Chain IDs:B
Chain Length:52
Number of Molecules:1
Biological Source:Lathyrus ochrus
Polymer Type:polypeptide(L)
Molecule:LEGUME ISOLECTIN I (ALPHA CHAIN)
Chain IDs:C
Chain Length:181
Number of Molecules:1
Biological Source:Lathyrus ochrus
Polymer Type:polypeptide(L)
Molecule:LEGUME ISOLECTIN I (BETA CHAIN)
Chain IDs:D
Chain Length:52
Number of Molecules:1
Biological Source:Lathyrus ochrus
Primary Citation
X-ray structure of a biantennary octasaccharide-lectin complex refined at 2.3-A resolution.
J.Biol.Chem. 267 197 203 (1992)
PMID: 1730588

Abstact

The structure and flexibility of saccharides have a profound and specific influence in several biological processes such as protein protection and the maintenance of conformational integrity, and in recognition events involving viruses, enzymes, and lectins. To establish the structural bases of these phenomena, we describe herein the extensively refined 2.3-A resolution x-ray structure of a biantennary octasaccharide of the N-acetyllactosamine type, complexed to isolectin I from Lathyrus ochrus. The two octasaccharides are located in clefts at each end of the long axis of the lectin. The conformations of both the lectin and the saccharide are slightly modified upon binding. The complex is stabilized by numerous hydrogen bonds, many of them involving water molecules. It is also stabilized by van der Waals interactions, including some with aromatic residues. A more general model of a possible lectin-glycoprotein interaction is also proposed.

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