1LJ2 image
Entry Detail
PDB ID:
1LJ2
Title:
Recognition of eIF4G by Rotavirus NSP3 reveals a basis for mRNA circularization
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2002-04-18
Release Date:
2002-07-05
Method Details:
Experimental Method:
Resolution:
2.38 Å
R-Value Free:
0.27
R-Value Work:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NONSTRUCTURAL RNA-BINDING PROTEIN 34
Mutations:C306S C314S
Chain IDs:A, B
Chain Length:110
Number of Molecules:2
Biological Source:Simian rotavirus A/SA11
Polymer Type:polypeptide(L)
Description:eukaryotic protein synthesis initiation factor
Chain IDs:C, D
Chain Length:28
Number of Molecules:2
Biological Source:
Ligand Molecules
Primary Citation
Recognition of eIF4G by rotavirus NSP3 reveals a basis for mRNA circularization.
Mol.Cell 9 1273 1283 (2002)
PMID: 12086624 DOI: 10.1016/S1097-2765(02)00555-5

Abstact

Rotaviruses, segmented double-stranded RNA viruses, co-opt the eukaryotic translation machinery with the aid of nonstructural protein 3 (NSP3), a rotaviral functional homolog of the cellular poly(A) binding protein (PABP). NSP3 binds to viral mRNA 3' consensus sequences and circularizes mRNA via interactions with eIF4G. Here, we present the X-ray structure of the C-terminal domain of NSP3 (NSP3-C) recognizing a fragment of eIF4GI. Homodimerization of NSP3-C yields a symmetric, elongated, largely alpha-helical structure with two hydrophobic eIF4G binding pockets at the dimer interface. Site-directed mutagenesis and isothermal titration calorimetry documented that NSP3 and PABP use analogous eIF4G recognition strategies, despite marked differences in tertiary structure.

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