1L0S image
Deposition Date 2002-02-12
Release Date 2002-06-19
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1L0S
Title:
Choristoneura fumiferana (spruce budworm) antifreeze protein isoform 337
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 65
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:thermal hysteresis protein
Mutagens:Y33F
Chain IDs:A, B, C, D
Chain Length:90
Number of Molecules:4
Biological Source:Choristoneura fumiferana
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TYI A TYR 3,5-DIIODOTYROSINE
Ligand Molecules
Primary Citation
Crystal structure of beta-helical antifreeze protein points to a general ice binding model.
Structure 10 619 627 (2002)
PMID: 12015145 DOI: 10.1016/S0969-2126(02)00745-1

Abstact

Reported here is the 2.3 A resolution crystal structure of spruce budworm (Choristoneura fumiferana) antifreeze protein (CfAFP), solved by single anomalous scattering. The structure reveals an extremely regular left-handed beta-helical platform consisting of 15-amino acid loops with a repetitive Thr-X-Thr motif displayed on one of the helix's three faces. This motif results in a two-dimensional array of threonine residues in an identical orientation to those in the nonhomologous, right-handed beta-helical beetle AFP from Tenebrio molitor (TmAFP). The CfAFP structure led us to reevaluate our ice binding model, and the analysis of three possible modes of docking gives rise to a binding mechanism based on surface complementarity. This general mechanism is applicable to both fish and insect AFPs.

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Chemical

Disease

Primary Citation of related structures