1L0Q image
Deposition Date 2002-02-12
Release Date 2002-11-06
Last Version Date 2025-03-26
Entry Detail
PDB ID:
1L0Q
Keywords:
Title:
Tandem YVTN beta-propeller and PKD domains from an archaeal surface layer protein
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Surface layer protein
Chain IDs:A, B, C, D
Chain Length:391
Number of Molecules:4
Biological Source:Methanosarcina mazei
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
YCM A CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE
Primary Citation

Abstact

The surface layer of archaeobacteria protects cells from extreme environments and, in Methanosarcina, may regulate cell adhesion. We identify three domain types that account for the complete architecture of numerous Methanosarcina surface layer proteins (SLPs). We solve the crystal structure for two of these domains, which correspond to the two N-terminal domains of an M. mazei SLP. One domain displays a unique, highly symmetrical, seven-bladed beta propeller fold, and the other belongs to the polycystic kidney disease (PKD) superfamily fold. The third domain is predicted to adopt a beta helix fold. These domains have homologs in metazoan cell surface proteins, suggesting remarkable relationships between domains in archaeal SLPs and metazoan cell surface proteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures