1KNC image
Deposition Date 2001-12-18
Release Date 2002-01-23
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1KNC
Title:
Structure of AhpD from Mycobacterium tuberculosis, a novel enzyme with thioredoxin-like activity.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.21
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:AhpD protein
Chain IDs:A, B, C
Chain Length:177
Number of Molecules:3
Biological Source:Mycobacterium tuberculosis
Ligand Molecules
Primary Citation
Metabolic enzymes of mycobacteria linked to antioxidant defense by a thioredoxin-like protein.
Science 295 1073 1077 (2002)
PMID: 11799204 DOI: 10.1126/science.1067798

Abstact

Mycobacterium tuberculosis (Mtb) mounts a stubborn defense against oxidative and nitrosative components of the immune response. Dihydrolipoamide dehydrogenase (Lpd) and dihydrolipoamide succinyltransferase (SucB) are components of alpha-ketoacid dehydrogenase complexes that are central to intermediary metabolism. We find that Lpd and SucB support Mtb's antioxidant defense. The peroxiredoxin alkyl hydroperoxide reductase (AhpC) is linked to Lpd and SucB by an adaptor protein, AhpD. The 2.0 angstrom AhpD crystal structure reveals a thioredoxin-like active site that is responsive to lipoamide. We propose that Lpd, SucB (the only lipoyl protein detected in Mtb), AhpD, and AhpC together constitute a nicotinamide adenine dinucleotide (reduced)-dependent peroxidase and peroxynitrite reductase. AhpD thus represents a class of thioredoxin-like molecules that enables an antioxidant defense.

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Primary Citation of related structures