1KMX image
Deposition Date 2001-12-17
Release Date 2002-07-24
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1KMX
Title:
Heparin-binding Domain from Vascular Endothelial Growth Factor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:vascular endothelial growth factor
Gene (Uniprot):VEGFA
Chain IDs:A
Chain Length:55
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Refinement of the Solution Structure of the Heparin-binding Domain of Vascular Endothelial Growth Factor using Residual Dipolar Couplings
J.BIOMOL.NMR 23 57 61 (2002)
PMID: 12061718 DOI: 10.1023/A:1015346504499

Abstact

Previous NMR structural studies of the heparin-binding domain of vascular endothelial growth factor (VEGF165) revealed a novel fold comprising two subdomains, each containing two disulfide bridges and a short two-stranded antiparallel beta-sheet. The mutual orientation of the two subdomains was poorly defined by the NMR data. Heteronuclear relaxation data suggested that this disorder resulted from a relative lack of experimental restraints due to the limited size of the interface, rather than inherent high-frequency flexibility. Refinement of the structure using 1H(N-15N residual dipolar coupling restraints results in significantly improved definition of the relative subdomain orientations.

Legend

Protein

Chemical

Disease

Primary Citation of related structures