1KKU image
Deposition Date 2001-12-10
Release Date 2002-06-10
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1KKU
Keywords:
Title:
Crystal structure of nuclear human nicotinamide mononucleotide adenylyltransferase
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
Gene (Uniprot):NMNAT1
Chain IDs:A
Chain Length:279
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structure of human NMN adenylyltransferase. A key nuclear enzyme for NAD homeostasis.
J.Biol.Chem. 277 8524 8530 (2002)
PMID: 11751893 DOI: 10.1074/jbc.M111589200

Abstact

Nicotinamide mononucleotide adenylyltransferase (NMNAT), a member of the nucleotidyltransferase alpha/beta-phosphodiesterases superfamily, catalyzes a universal step (NMN + ATP = NAD + PP(i)) in NAD biosynthesis. Localized within the nucleus, the activity of the human enzyme is greatly altered in tumor cells, rendering it a promising target for cancer chemotherapy. By using a combination of single isomorphous replacement and density modification techniques, the human NMNAT structure was solved by x-ray crystallography to a 2.5-A resolution, revealing a hexamer that is composed of alpha/beta-topology subunits. The active site topology of the enzyme, analyzed through homology modeling and structural comparison with other NMNATs, yielded convincing evidence for a substrate-induced conformational change. We also observed remarkable structural conservation in the ATP-recognition motifs GXXXPX(T/H)XXH and SXTXXR, which we take to be the universal signature for NMNATs. Structural comparison of human and prokaryotic NMNATs may also lead to the rational design of highly selective antimicrobial drugs.

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