1KGY image
Deposition Date 2001-11-28
Release Date 2002-05-28
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1KGY
Title:
Crystal Structure of the EphB2-ephrinB2 complex
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.29
R-Value Work:
0.24
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EPHRIN TYPE-B RECEPTOR 2
Gene (Uniprot):Ephb2
Chain IDs:A, B, C, D
Chain Length:181
Number of Molecules:4
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EPHRIN-B2
Gene (Uniprot):Efnb2
Chain IDs:E, F, G, H
Chain Length:138
Number of Molecules:4
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Crystal structure of an Eph receptor-ephrin complex.
Nature 414 933 938 (2001)
PMID: 11780069 DOI: 10.1038/414933a

Abstact

The Eph family of receptor tyrosine kinases and their membrane-anchored ephrin ligands are important in regulating cell-cell interactions as they initiate a unique bidirectional signal transduction cascade whereby information is communicated into both the Eph-expressing and the ephrin-expressing cells. Initially identified as regulators of axon pathfinding and neuronal cell migration, Ephs and ephrins are now known to have roles in many other cell-cell interactions, including those of vascular endothelial cells and specialized epithelia. Here we report the crystal structure of the complex formed between EphB2 and ephrin-B2, determined at 2.7 A resolution. Each Eph receptor binds an ephrin ligand through an expansive dimerization interface dominated by the insertion of an extended ephrin loop into a channel at the surface of the receptor. Two Eph-Ephrin dimers then join to form a tetramer, in which each ligand interacts with two receptors and each receptor interacts with two ligands. The Eph and ephrin molecules are precisely positioned and orientated in these complexes, promoting higher-order clustering and the initiation of bidirectional signalling.

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Primary Citation of related structures