1K8Y image
Deposition Date 2001-10-26
Release Date 2002-06-19
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1K8Y
Keywords:
Title:
CRYSTAL STRUCTURE OF THE TRYPTOPHAN SYNTHASE BETA-SER178PRO MUTANT COMPLEXED WITH D,L-ALPHA-GLYCEROL-3-PHOSPHATE
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TRYPTOPHAN SYNTHASE ALPHA CHAIN
Gene (Uniprot):trpA
Chain IDs:A
Chain Length:268
Number of Molecules:1
Biological Source:Salmonella typhimurium
Polymer Type:polypeptide(L)
Molecule:TRYPTOPHAN SYNTHASE BETA CHAIN
Gene (Uniprot):trpB
Mutations:S178P
Chain IDs:B
Chain Length:396
Number of Molecules:1
Biological Source:Salmonella typhimurium
Primary Citation
Crystal structure of the beta Ser178--> Pro mutant of tryptophan synthase. A "knock-out" allosteric enzyme.
J.Biol.Chem. 277 10653 10660 (2002)
PMID: 11756454 DOI: 10.1074/jbc.M111031200

Abstact

The catalytic activity of the pyridoxal 5'-phosphate-dependent tryptophan synthase alpha(2)beta(2) complex is allosterically regulated. The hydrogen bond between the helix betaH6 residue betaSer(178) and the loop alphaL6 residue Gly(181) was shown to be critical in ligand-induced intersubunit signaling, with the alpha-beta communication being completely lost in the mutant betaSer(178) --> Pro (Marabotti, A., De Biase, D., Tramonti, A., Bettati, S., and Mozzarelli, A. (2001) J. Biol. Chem. 276, 17747-17753). The structural basis of the impaired allosteric regulation was investigated by determining the crystal structures of the mutant betaSer(178) --> Pro in the absence and presence of the alpha-subunit ligands indole-3-acetylglycine and glycerol 3-phosphate. The mutation causes local and distant conformational changes especially in the beta-subunit. The ligand-free structure exhibits larger differences at the N-terminal part of helix betaH6, whereas the enzyme ligand complexes show differences at the C-terminal side. In contrast to the wild-type enzyme loop alphaL6 remains in an open conformation even in the presence of alpha-ligands. This effects the equilibrium between active and inactive conformations of the alpha-active site, altering k(cat) and K(m), and forms the structural basis for the missing allosteric communication between the alpha- and beta-subunits.

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Primary Citation of related structures