1K8V image
Deposition Date 2001-10-25
Release Date 2002-06-12
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1K8V
Title:
The NMR-derived Conformation of Neuropeptide F from Moniezia expansa
Biological Source:
Source Organism:
(Taxon ID: )
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NEUROPEPTIDE F
Chain IDs:A
Chain Length:40
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
The NMR-derived conformation of neuropeptide F from Moniezia expansa.
J.Biomol.Struct.Dyn. 19 991 998 (2002)
PMID: 12023801

Abstact

The solution structure of neuropeptide F (NPF), from the flatworm (platyhelminthes) Moniezia expansa, has been determined by (1)H NMR spectroscopy at 800 MHz in 60%/40% CD(3)OH/H(2)O. NPF is the most abundant neuropeptide in platyhelminthes. The secondary structure of NPF contains an alpha helix from residues Lys(14) to Ile(31), while the N terminus, consisting of residues Pro(-2) to Asn(13), and the C-terminus, consisting of residues Gly(32) to Phe(36), are in a random conformation. The structure was calculated by a simulated annealing protocol, and the conformational data are compared to the porcine neuropeptide Y (NPY), a peptide hormone and neurotransmitter. The exact function of NPF is unknown, but structural similarity with porcine NPY indicates that its mode of action is similar. These structural data can serve as a starting point in the design of new antiparasitic drugs.

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Primary Citation of related structures